Okay, I fitted a more correct value resistor (100K) for the gain pot load resistor, and put the cathode resistor by pass cap back in*, with a 10k resistor between it and ground. Success! This amp sounds very good now.
The fizz and sack full of bumble bees buzz are gone gone gone. The red channel now is actually mostly clean up to 3 on the gain knob. From 3 to 4 its more of a crunch, but by 5 its starting to get some serious gain. Up to 5 1/2 to 6 you can get a higher gain overdrive with the guitar volume up, but turn the guitar down a bit and/or back off on the pick attack and it cleans up fairly well. You can just ignore the green channel and play the red channel exclusively if you want. Up to 7 your getting into searing high gain real estate. And its all usable gain, unlike the stock amp. The tone controls now work quite well if you want more cut or a warmer girth.
The amp works this way with my Tone Zone loaded Charvel as well as with vintage output pickups.
The main draw back is that it makes the green channel more or less not very useful. The main purpose of the green channel now becomes loud cleans, or a pedal platform, but this only a 15 watt amp. I may revisit the green channel mods, or de-mod, the green channel now.
I will have to go through and replace some of the carbon comp resistors I used with metal film, because I had them on hand, to lower the noise floor of the amp. The noise level is still unacceptable to me.
* The original mod list calls for just clipping this cap out. But I found that it needs to be in there. The tone is fatter and smoother and the amp has less noise.